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Details




NbTI01G12

Phenotype Description
Moderately stunted, more branches, slender branches, narrow, pale green leaves
Annotation
Solyc09g007920.2.1;genomic_reference:SL2.50ch09 gene_region:1435451-1440492 transcript_region:SL2.50ch09:1435451..1440492+ functional_description:"Phenylalanine ammonia-lyase (AHRD V1 **** B5LAW0_CAPAN); contains Interpro domain(s) IPR005922 Phenylalanine ammonia-lyase "
ref|XP_009629066.1|;PREDICTED: phenylalanine ammonia-lyase [Nicotiana tomentosiformis]sp|P25872.1|PAL1_TOBAC RecName: Full=Phenylalanine ammonia-lyasegb|AAA34122.1| phenylalanine ammonia lyase [Nicotiana tabacum]dbj|BAA22948.1| phenylalanine ammonia-lyase [Nicotiana tabacum]
NbS00007038g0001.1;protein AED:0.05 eAED:0.05 QI:0|0|0|1|1|1|2|0|680; (*GB) gi|215400624|gb|ACJ66297.1| (e_value=0.0) phenylalanine ammonia-lyase 4 [Nicotiana tabacum];; (*SWP) sp|P25872|PAL1_TOBAC (e_value=0.0) Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=TPA1 PE=2 SV=1;; (*TAIR) AT2G37040.1 (e_value=0.0) | Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 | chr2:15557602-15560237 REVERSE LENGTH=725;; (*ITAG) Solyc09g007920.2.1 (e_value=0.0) genomic_reference:SL2.40ch09 gene_region:1435451-1440492 transcript_region:SL2.40ch09:1435451..1440492+ functional_description:"Phenylalanine ammonia-lyase (AHRD V1 **** B5LAW0_CAPAN); contains Interpro domain(s) IPR005922 Phenylalanine ammonia-lyase ";
AT2G37040.1;| Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 | chr2:15557602-15560237 REVERSE LENGTH=725
GO ID (Nr annotation)
GO:0003824
GO ID (Arabidopsis annotation)
GO:0003824
GO ID (Tomato annotation)
GO:0003824
GO ID (Niben annotation)
GO:0003824
Sequence
>NbTI01G12
AGGACACCCCTATCGGCGTCTCCATGGATAATGCAAGATTGGCTCTTGCATCAATTGGAAAGTTGATGTTTGCTCAATTCTCGGAACTTGTCAATGACTA
CTACAACAATGGTTTGCCATCTAATCTCACCGCGTCAAGGAATCCAAGCTTGGACTATGGTTTCAAGGGAGCTGAAATCGCCATGGCTTCTTACTGCTCA
GAACTTCAATTCTTGGCAAATCCAGTGACAAACCATGTCCAAAGTGCGGAGCAACACAACCAAGATGTCAACTCCTTAGGCTTAATCTCAGCAAGGAAAA
CAGCTGAAGCTGTCGATATCTTAAAACTCATGTCATCAACTTATCTGGTGGCACTTTGCCAAGCTATCGACTTGAGGCATTTGGAGGAAAACTTAAAGAA
TGCAGTCAAGAACACAGTTAGCCAAGTAGCTAAGAGAACTCTAACAATGGGTGCTAATGGTGAACTTCATCCAGCAAGATTCTGCGAGAAGGAGTTGCTA
CGAGTCGTGGATAGGGAATACTTGTTCGCCTACGCTGATGATCCTTGCAGTTGCAACTACCCTCTAATGCAAAAACTGAGACAAGTACTTGTTGATCATG
CAATGAATAATGGTGAAAGTGAGAAGAATGTGAATAGCTCAATCTTCCAAAAGATTGGAGCTTTCGAAGACGAATTAAAGGCTGTTTTACCTAAAGAAGT
CGAAAGTGCAAGAGCTGCATTAGAAAGTGGCAACCCTGCTATTCCTAACAGGATTACAGAATGCAGATCTTATCCATTGTACAGGTTTGTGAGAAAGGAG
CTTGGAAACAGAACTACTAAC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:1E1-1H12 [7-5-12]//1G12.JPG