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Details




NbTI03D03

Phenotype Description
Plants were similar to vector control plants
Annotation
Solyc07g042490.1.1;evidence_code:10F1H0E1IEG genomic_reference:SL2.50ch07 gene_region:53019216-53019608 transcript_region:SL2.50ch07:53019216..53019608- functional_description:"SAUR33-auxin-responsive SAUR family member (AHRD V1 ***- B6T035_MAIZE); contains Interpro domain(s) IPR003676 Auxin responsive SAUR protein "
ref|XP_009764073.1|;PREDICTED: uncharacterized protein LOC104215847 [Nicotiana sylvestris]
NbS00016278g0001.1;protein AED:0.00 eAED:0.00 QI:0|-1|0|1|-1|1|1|0|128; (*GB) gi|224069236|ref|XP_002326308.1| (e_value=7e-46) SAUR family protein [Populus trichocarpa];; (*TAIR) AT5G20820.1 (e_value=2e-30) | Symbols: | SAUR-like auxin-responsive protein family | chr5:7046911-7047294 REVERSE LENGTH=127;; (*ITAG) Solyc07g042490.1.1 (e_value=3e-66) evidence_code:10F1H0E1IEG genomic_reference:SL2.40ch07 gene_region:53019216-53019608 transcript_region:SL2.40ch07:53019216..53019608- functional_description:"SAUR33-auxin-responsive SAUR family member (AHRD V1 ***- B6T035_MAIZE); contains Interpro domain(s) IPR003676 Auxin responsive SAUR protein ";
AT5G20820.1;| Symbols: | SAUR-like auxin-responsive protein family | chr5:7046911-7047294 REVERSE LENGTH=127
GO ID (Nr annotation)
GO:0009733
GO ID (Arabidopsis annotation)
GO:0009733
GO ID (Tomato annotation)
GO:0009733
GO ID (Niben annotation)
GO:0009733
Sequence
>NbTI03D03
CTCTCTCTCCCTTCAAAATTTTCCATTTTTAACCTTACAAAAAATGGCCAAAGGAGGCAAACTCACGAAACTCAAATCTGTGTTAAAGAAAATGCAATCC
TTCAAACTCGGCCGCGTAAATGGCAGCGCCGTCGTAGCCACACATCATTCTTCCTCCTCGGACGAAGATTCCTTTTCCGATGATAATCACTGCTCTAACA
AAAATGTGTATCCTGTCTATGTCGGAAAATCGCGCCGCCGGTACCTTGTAAACTCCGACGTCGTTGACCACCCGCTTTTCCGTGAACTCGTCGAAAAGTC
CGGCGATTCTGAAGAATATATTACAGTTGGATGTGAAGTTGTTCTCTTTGAACATTTGCTTTGGATGCTTGAAAATGCTGATCCTCAGCCTGAGTCATTG
GATGAGTTGGTTGAATTTTACTCTTGCTGATGTGGAATAACTGTCAGTAACTGAATTGAAAAAAGAAATAACCGTGACGTGGACGTGGTAATTGGATATG
ACCACACACTATCTCGTATATAGCTGTAAATTTTTCTTTTTTGGTCATATGATTTTGATTAATTAGGTGTAGAAAGAGGAAAAAAGAAAAT
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3A1-3D12[7-12-12]//3D3..JPG