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Details




NbTI03D10

Phenotype Description
Mottled, pale green leaves
Annotation
Solyc11g066080.1.1;evidence_code:10F1H0E1IEG genomic_reference:SL2.50ch11 gene_region:48838045-48838875 transcript_region:SL2.50ch11:48838045..48838875- functional_description:"Genomic DNA chromosome 5 BAC clone F2O15 (AHRD V1 ***- Q9LTJ3_ARATH)"
ref|XP_009803866.1|;PREDICTED: uncharacterized protein LOC104249190 [Nicotiana sylvestris]
NbS00010306g0002.1;protein AED:0.41 eAED:0.41 QI:0|0|0|0.5|1|1|2|0|225; (*GB) gi|224059506|ref|XP_002299880.1| (e_value=4e-68) predicted protein [Populus trichocarpa];; (*TAIR) AT5G59350.1 (e_value=1e-36) | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:23941132-23941995 FORWARD LENGTH=287;; (*ITAG) Solyc11g066080.1.1 (e_value=7e-94) evidence_code:10F1H0E1IEG genomic_reference:SL2.40ch11 gene_region:48838045-48838875 transcript_region:SL2.40ch11:48838045..48838875- functional_description:"Genomic DNA chromosome 5 BAC clone F2O15 (AHRD V1 ***- Q9LTJ3_ARATH)";
AT5G59350.1;| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:23941132-23941995 FORWARD LENGTH=287
GO ID (Nr annotation)
GO:0016020
GO ID (Arabidopsis annotation)
GO ID (Tomato annotation)
GO ID (Niben annotation)
Sequence
>NbTI03D10
TAGGAAATAGCAAAGATTTGCTATTAAAAGGGTATGGTGAAGATAGTGTGGAGTCAGAATTAATGAGATTACACAATCTTTGTGGACCTCCAAGATTTTT
ATTTACAATTAAAGAGGAAACAAAAGAAGATTTGGAATCTGAAGATGGTAAATCAAGAGGTGAAAGAAGTAGAACTTGTTCAAGAACAAGAAGTTTAAGT
GATTTAATTCTTACTCCTTTATCTTCACCACCAATTAAAGGTCACAATCTTGATTCTTACAATTGCCAAGGATTCAATCCTCTCTTTGAATCTTCAACAG
AAACTGAATTAAACAGACTCACATCTTCACCCCCACCAAAATTCAAGTTCCTAAGAGATGCTGAAGAGAAACTTATAAGAAAATTGATTGAAGAAGCTGA
GAAAAGGGGTCTTAAAAATGAGGTTTCATTTCAAGATTCTGCAATTAATAAATCATGTGCTAATGAGGAGAAACAACAACAACAACGGCCTGGTGTAATC
CCATTAGTGGGTTACGAGGAGGGTAATATATACGCAGATCTTAGCCTTACTCCGAAGGGCAAAGAGGATGTATCCAGAATACCCTCGGCTCAAGAAGGCG
ACAAGAGACTTGCTAATGAGGAGAAAGGGGTCATTTATTTCATTTCTTAGTAAGAGCAAATTTGAGGGAGCCACTACAGCAATTAC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3A1-3D12[7-12-12]//3D10..JPG