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Details




NbTI03E06

Phenotype Description
Bushy plants, moderately narrow, mottled, crinkled leaves
Annotation
Solyc12g056770.1.1;evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch12 gene_region:48211261-48217095 transcript_region:SL2.50ch12:48211261..48217095+ functional_description:"F-actin capping protein beta subunit family protein (AHRD V1 ***- D7KYY1_ARALY); contains Interpro domain(s) IPR001698 F-actin capping protein, beta subunit "
ref|XP_009775201.1|;PREDICTED: probable F-actin-capping protein subunit beta [Nicotiana sylvestris]
NbS00045000g0001.1;protein AED:0.17 eAED:0.18 QI:233|0.71|0.87|1|1|1|8|410|252; (*GB) gi|225463119|ref|XP_002265135.1| (e_value=3e-136) PREDICTED: probable F-actin-capping protein subunit beta [Vitis vinifera];; (*SWP) sp|Q9M9G7|CAPZB_ARATH (e_value=1e-130) Probable F-actin-capping protein subunit beta OS=Arabidopsis thaliana GN=At1g71790 PE=2 SV=1;; (*TAIR) AT1G71790.1 (e_value=8e-132) | Symbols: | Subunits of heterodimeric actin filament capping protein Capz superfamily | chr1:26996869-26998785 FORWARD LENGTH=256;; (*ITAG) Solyc12g056770.1.1 (e_value=1e-151) evidence_code:10F0H1E1IEG genomic_reference:SL2.40ch12 gene_region:48211261-48217095 transcript_region:SL2.40ch12:48211261..48217095+ functional_description:"F-actin capping protein beta subunit family protein (AHRD V1 ***- D7KYY1_ARALY); contains Interpro domain(s) IPR001698 F-actin capping protein, beta subunit ";
AT1G71790.1;| Symbols: | Subunits of heterodimeric actin filament capping protein Capz superfamily | chr1:26996869-26998785 FORWARD LENGTH=256
GO ID (Nr annotation)
GO:0008290 GO:0051016
GO ID (Arabidopsis annotation)
GO:0008290 GO:0051016
GO ID (Tomato annotation)
GO:0008290 GO:0051016
GO ID (Niben annotation)
GO:0008290 GO:0051016
Sequence
>NbTI03E06
GCCTGGGATGCCATACATGTTATTGAGGTGGGACCAGAAGAGGAAGGAATTGCCCAATACTGCCTGACTAGTACGGTGATGCTGACCTTGACTACAGACA
ATGAGTCATCAGGCTCGTTCAATTTATCTGGATCAATTAGAAGACAGATGAGTATGAAGCTCTCTGTCTCAGATGGTCATCTGTGCAACATGGGAAAGAT
GATTGAAGAGATGGAGGGTAAGCTGAGAAACTCCTTGGATCAGGTATATTTTGGGAAGACAAAGGAAATGGTTTGTACTCTGAGGCCACCTGCTGAACTG
GTGACATTGCCGGACAGCTGAAATTTGTTATTTCTTGCCTTTTCTGCTGGGTGTTTCTGTAAACCTTTGTTTGCTTCCATATGTCACAGGGTTGTTCAGT
GTTCATTAAATTGATAACTGATTGTATCATATCTTGTTTGAGTCAATTCTTAGTTGTAGATTGTCTGAAAATATCTCCTCACTTTTCTTTTACATGTGGC
CGTACAAATTATTTCGTCAAGGGACTAATTTGGACACATGAGGAGACAAGAGGATTGATTGATCTCTC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3E1-3H12[7-19-12]//3E6.JPG