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Details




NbTI03E07

Phenotype Description
Plants were similar to vector control plants
Annotation
Solyc09g064510.2.1;genomic_reference:SL2.50ch09 gene_region:57382052-57386217 transcript_region:SL2.50ch09:57382052..57386217+ functional_description:"Transcriptional activator TenA family (AHRD V1 *-*- Q117V2_TRIEI); contains Interpro domain(s) IPR004305 TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C "
ref|XP_009803379.1|;PREDICTED: uncharacterized protein LOC104248763 isoform X2 [Nicotiana sylvestris]
NbS00047479g0015.1;protein AED:0.15 eAED:0.15 QI:0|1|1|1|1|1|6|126|558; (*GB) gi|118486577|gb|ABK95127.1| (e_value=0.0) unknown [Populus trichocarpa];; (*TAIR) AT5G32470.1 (e_value=0.0) | Symbols: | Haem oxygenase-like, multi-helical | chr5:12085328-12088569 REVERSE LENGTH=617;; (*ITAG) Solyc09g064510.2.1 (e_value=0.0) genomic_reference:SL2.40ch09 gene_region:57382052-57386217 transcript_region:SL2.40ch09:57382052..57386217+ functional_description:"Transcriptional activator TenA family (AHRD V1 *-*- Q117V2_TRIEI); contains Interpro domain(s) IPR004305 TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C ";
AT5G32470.1;| Symbols: | Haem oxygenase-like, multi-helical | chr5:12085328-12088569 REVERSE LENGTH=617
GO ID (Nr annotation)
GO:0050334 GO:0008152
GO ID (Arabidopsis annotation)
GO ID (Tomato annotation)
GO ID (Niben annotation)
Sequence
>NbTI03E07
ATAGCTTTGCCTGCTTAATGCAGACGTGGGGATTGTGATTGGTCTGAGTGCTGGCCTTAGAAGATTAGGTGAACAGTTTGGTATTTCTTTTGTTCCACTG
TTCTCCGGTCTGGTAACAAAACAGAGGGAACTAGCTGAAGGTGGTTTGAAGGGGATGTCTGGCATTCTTTACACTGTCTCCAGTTGGTCTGAGATTCATG
CATTCATTTTGGGATTATAGACTTCCAAGCCCCCGGCCATGTAGCTGCTCCCTGAAGCATGTGTCAGGGGGTAATGGGGGTTGGTCCTGAGAATAACAGG
CATATAGATTAGGTTGTGTCGTCTAACATGTGGCTAATCAAATTACATGGTCCATGTGTCAGTCCTTGGTCATTTTTTCGTTGAAGGACTAGTAGCCCGC
GTAAAGTTATACTGTTTGGTGATTTTTAGGGCCCAAGGCAATTCAGTTACTCCAGGCAATTAGTACTATAGTTTGTTTTCTTTGCGCTACTCACCTCGTG
TTTTAAAGCATTGTAGTTGATCGCTTTCTCAAGCTTTTAACGGTGAGAAGTATGAGACATTGTGAATCTGCCTCGGTGTAAATCCTGAATATGAGATGAT
TTTATTAGGAATCTCATTTTCAGGATATTTGTTGCTTTACATATATTTAGTAAGGCAACATGGAAAAGTCAATTGTTTGTCAGGTATTTACTTGTAACTG
AACATATGATTTGA
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3E1-3H12[7-19-12]//3E7..JPG