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Details




NbTI03E10

Phenotype Description
Plants were similar to vector control plants
Annotation
Solyc01g010640.2.1;genomic_reference:SL2.50ch01 gene_region:5646161-5647113 transcript_region:SL2.50ch01:5646161..5647113+ functional_description:"Uncharacterized membrane protein (AHRD V1 **-- Q46JN3_PROMT); contains Interpro domain(s) IPR001395 Aldo/keto reductase "
ref|XP_009789702.1|;PREDICTED: uncharacterized protein LOC104237287 [Nicotiana sylvestris]
NbS00039745g0002.1;protein AED:0.28 eAED:0.28 QI:0|-1|0|1|-1|1|1|0|191; (*GB) gi|357486707|ref|XP_003613641.1| (e_value=2e-78) Putativ eribonuclease P [Medicago truncatula];; (*TAIR) AT1G14345.1 (e_value=4e-77) | Symbols: | NAD(P)-linked oxidoreductase superfamily protein | chr1:4899176-4899766 FORWARD LENGTH=196;; (*ITAG) Solyc01g010640.2.1 (e_value=2e-99) genomic_reference:SL2.40ch01 gene_region:5646161-5647113 transcript_region:SL2.40ch01:5646161..5647113+ functional_description:"Uncharacterized membrane protein (AHRD V1 **-- Q46JN3_PROMT); contains Interpro domain(s) IPR001395 Aldo/keto reductase ";
AT1G14345.1;| Symbols: | NAD(P)-linked oxidoreductase superfamily protein | chr1:4899176-4899766 FORWARD LENGTH=196
GO ID (Nr annotation)
GO:0016021
GO ID (Arabidopsis annotation)
GO ID (Tomato annotation)
GO ID (Niben annotation)
GO:0005615 GO:0005125 GO:0005126 GO:0051607
Sequence
>NbTI03E10
TCCTCCAAGCCAGTTGCAGCCACAGCATCGTCAGTCCAAACCCAATCAAGAAACCATCTTTTTCGACGGCGGAGCTCACTACGGAGACCTCTTAGCTAAC
CTTCTTCTGGGTTTCACTCTTGTTTGGATGCCGTTAACTCTAGCTGCAGTATTTAGGGCTTTCTATTTGAGGTACAGGTTTACAAATTTGAGGGTCACAG
TTATTTCTGGGCTAACTGGTCAAGAGAGGAGTGACTTTTCATATAAAGTGGTCAAAGATGTTCAGGTTGTGCCAAGGTTCATTGGGGAATGGGGTGATGT
TATTATCACTTTGAAGGATGGAACAAAGGTGGATTTGAGAAGTGTTCCTAAATTTAGAGAGATTGCTAAGTATTGCCTTTCTATGACTGATAATCAAGAG
CTTGGGGTTTTGAAGGAGACTGATGGGCCTAAAGGATTTTGAGAAATGGTTAATTTGTTGATTTCATACTTTTGTTCTCTTTCTGAAGAGGTATGTAAAG
TCTTAATTATTCAACAATGATAATGGCTAGTAAACTGTGCTATGTAATAATTTTGTGCCCAATTGATTTGTATATTTGAGAAGGGAAGTTCTTATAAGA
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3E1-3H12[7-19-12]//3E10..JPG