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Details




NbTI03F01

Phenotype Description
Stunted plants, crinkled, yellow green leaves
Annotation
Solyc04g009200.2.1;genomic_reference:SL2.50ch04 gene_region:2695320-2699163 transcript_region:SL2.50ch04:2695320..2699163- functional_description:"Glutamate-1-semialdehyde-2 1-aminomutase (AHRD V1 **** D7MPQ2_ARALY); contains Interpro domain(s) IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase "
sp|P31593.1|GSA_TOBAC;RecName: Full=Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; Short=GSA; AltName: Full=Glutamate-1-semialdehyde aminotransferase; Short=GSA-AT; Flags: Precursoremb|CAA46786.1| glutamate-1-semialdehyde 2,1-aminomutase [Nicotiana tabacum]
NbS00060621g0001.1;protein AED:0.09 eAED:0.09 QI:0|1|0.66|1|1|1|3|0|478; (*GB) gi|19875|emb|CAA46787.1| (e_value=0.0) glutamate-1-semialdehyde 2,1-aminomutase [Nicotiana tabacum];; (*SWP) sp|P31593|GSA_TOBAC (e_value=0.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Nicotiana tabacum GN=GSA PE=2 SV=1;; (*TAIR) AT3G48730.1 (e_value=0.0) | Symbols: GSA2 | glutamate-1-semialdehyde 2,1-aminomutase 2 | chr3:18049697-18051550 FORWARD LENGTH=472;; (*ITAG) Solyc04g009200.2.1 (e_value=0.0) genomic_reference:SL2.40ch04 gene_region:2695320-2699163 transcript_region:SL2.40ch04:2695320..2699163- functional_description:"Glutamate-1-semialdehyde-2 1-aminomutase (AHRD V1 **** D7MPQ2_ARALY); contains Interpro domain(s) IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase ";
AT5G63570.1;| Symbols: GSA1 | glutamate-1-semialdehyde-2,1-aminomutase | chr5:25451957-25453620 FORWARD LENGTH=474
GO ID (Nr annotation)
GO:0008483 GO:0030170
GO ID (Arabidopsis annotation)
GO:0008483 GO:0030170
GO ID (Tomato annotation)
GO:0008483 GO:0030170
GO ID (Niben annotation)
GO:0008483 GO:0030170
Sequence
>NbTI03F01
TTTTATGGCAGTCGAATTTTACTCAGTGTCAAAGACCCACATTGGTTTCCTCTCCATCTCCCCGCCGATGCATTCCATGTTCTTCTTCTACTGCAACTAC
CATCAGGATGACTGTTTCAGTTGATGAAAAGCAGAAAACCTATACTCTTCAAAAGTCTGAAGAAGCTTTTAATAAAGCTAAGGAGTTGATGCCAGGTGGT
GTAAATTCTCCTGTACGTGCTTTCAAGTCAGTTGGCGGACAACCTGTTGTGATCGACTCTGTGAAGGGTTCTCATATGTGGGATATAGATGGTAATGAGT
ACATTGATTATGTCGGTTCATGGGGGCCAGCTATCATTGGCCATGCAGATAACGAGGTGCTAGCAGCCTTGGCTGAGACAATGAAGAAAGGAACAAGTTT
TGGTGCTCCATGCCTCCTCGAAAATACTTTGGCAGAAATGGTTATTTCTGCTGTTCCTAGTATTGAAATGGTTCGTTTCGTCAACTCTGGCACAGAGGCA
TGCAT
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3E1-3H12[7-19-12]//3F1..JPG