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Details




NbTI03F06

Phenotype Description
Stunted, bushy plants, crinkled, mosaic green leaves
Annotation
Solyc07g043360.1.1;evidence_code:10F1H1E1IEG genomic_reference:SL2.50ch07 gene_region:54370663-54371070 transcript_region:SL2.50ch07:54370663..54371070- functional_description:"60S ribosomal protein L27 (AHRD V1 ***- A5C1Z2_VITVI); contains Interpro domain(s) IPR001141 Ribosomal protein L27e "
ref|XP_009787670.1|;PREDICTED: 60S ribosomal protein L27-3-like [Nicotiana sylvestris]
NbS00056842g0001.1;protein AED:0.26 eAED:0.26 QI:0|0|0.5|1|0|0.5|2|335|135; (*GB) gi|225423704|ref|XP_002277425.1| (e_value=3e-68) PREDICTED: 60S ribosomal protein L27-3 isoform 1 [Vitis vinifera];; (*SWP) sp|P51419|RL273_ARATH (e_value=1e-64) 60S ribosomal protein L27-3 OS=Arabidopsis thaliana GN=RPL27C PE=2 SV=2;; (*TAIR) AT4G15000.1 (e_value=7e-66) | Symbols: | Ribosomal L27e protein family | chr4:8571896-8572303 FORWARD LENGTH=135;; (*ITAG) Solyc07g043360.1.1 (e_value=1e-77) evidence_code:10F1H1E1IEG genomic_reference:SL2.40ch07 gene_region:54370663-54371070 transcript_region:SL2.40ch07:54370663..54371070- functional_description:"60S ribosomal protein L27 (AHRD V1 ***- A5C1Z2_VITVI); contains Interpro domain(s) IPR001141 Ribosomal protein L27e ";
AT4G15000.1;| Symbols: | Ribosomal L27e protein family | chr4:8571896-8572303 FORWARD LENGTH=135
GO ID (Nr annotation)
GO:0005840 GO:0003735 GO:0006412
GO ID (Arabidopsis annotation)
GO:0005840 GO:0003735 GO:0006412
GO ID (Tomato annotation)
GO:0005840 GO:0003735 GO:0006412
GO ID (Niben annotation)
GO:0005840 GO:0003735 GO:0006412
Sequence
>NbTI03F06
ACCAAATCGCAAAAATGGTGAAATTCCTGAAGCCAAACAAAGCCGTAGTCGTACTCCAAGGGCGCTACGCCGGGAGGAAAGCTGTGATTGTTCGAGCTTT
TGACGATGGGACACGTGATAGGCCCTACGGTCACTGTTTGGTCGTCGGCGTATCGAAATACCCAAAGAAAGTGATTCGTAAGGATTCTGATAAAAAACAG
GCGAAGAAATCACGGGTTAAGACTTTCATTAAGCTGGTTAATTATAACCACATTATGCCGACGCGTTACACATTGGATGTTGATTTGAAGGAAGCTGTTA
CTGTTGATTGTCTTCAGTCACGTGATAAGAAGGTGACTGCTGCTAAAGAGGCGAAAGCTAAGTTTGAAGAGCGATTTAAGACTGGGAAAAATCGCTGGTT
CTTTTCCAAGCTTAGATTTTGAGTTGATTTTGCTCTTTATTTGTAGTAAATTGTGCTGAGGCTCAAGGAAAGCTATTACTGTTGATTTCCTTTAGTCAAG
TGAGAAGAAGGTGTCTGCCGCTAAAGAAGCTAAGGCCATGTTTGAAGAGCAATTTACCAATCATAGGTTTTGAGTTGTTTATTTTGTAATTTTCTCTTAA
TGGG
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3E1-3H12[7-19-12]//3F6..JPG