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Details




NbTI03F11

Phenotype Description
Pale green leaves
Annotation
Solyc08g076470.2.1;genomic_reference:SL2.50ch08 gene_region:57639436-57652592 transcript_region:SL2.50ch08:57639436..57652592+ functional_description:"Glycerol-3-phosphate acyltransferase (AHRD V1 **** Q7XYH5_CAPAN); contains Interpro domain(s) IPR016222 Glycerol-3-phosphate O-acyltransferase "
ref|XP_009608194.1|;PREDICTED: glycerol-3-phosphate acyltransferase, chloroplastic isoform X2 [Nicotiana tomentosiformis]
NbS00009358g0004.1;protein AED:0.37 eAED:0.38 QI:0|0.83|0.69|0.92|1|1|13|0|477; (*GB) gi|46095233|gb|AAP79443.2| (e_value=0.0) glycerol-3-phosphate acyltransferase [Capsicum annuum];; (*SWP) sp|Q39639|PLSB_CUCSA (e_value=0.0) Glycerol-3-phosphate acyltransferase, chloroplastic OS=Cucumis sativus PE=2 SV=1;; (*TAIR) AT1G32200.2 (e_value=0.0) | Symbols: ATS1, ACT1 | phospholipid/glycerol acyltransferase family protein | chr1:11602223-11605001 REVERSE LENGTH=459;; (*ITAG) Solyc08g076470.2.1 (e_value=0.0) genomic_reference:SL2.40ch08 gene_region:57639436-57652592 transcript_region:SL2.40ch08:57639436..57652592+ functional_description:"Glycerol-3-phosphate acyltransferase (AHRD V1 **** Q7XYH5_CAPAN); contains Interpro domain(s) IPR016222 Glycerol-3-phosphate O-acyltransferase ";
AT1G32200.2;| Symbols: ATS1, ACT1 | phospholipid/glycerol acyltransferase family protein | chr1:11602223-11605001 REVERSE LENGTH=459
GO ID (Nr annotation)
GO:0009570 GO:0004366 GO:0006655
GO ID (Arabidopsis annotation)
GO ID (Tomato annotation)
GO ID (Niben annotation)
Sequence
>NbTI03F11
AAAAGAATAATATCTTTTCATGGAACTGGCATATCCGTGGGGCCCAAAATTGATTTTCATGAGATTGCTGGTGCTTTGGAAGACCCTGAAGAGGCTAAGA
TGGTCTACACTAAGGCACTTTATGACTCTGTAAACCAGCAGTACAACGTGCTAAATTCTGCTATACATGGCAAACAAGGACAGGAGGCATCAACTCCCAG
CATTTCATTATCACAACCATGGCAATAGCTTCGTTCAAACTTTATTTTCCATATCTTGTTGCTTCAGTCAGATGTTTGTTTGGAAGTTATAATCAAATCA
AATCACAAGGATAACACTCACAAACTATGCCACACTTTGCGCTTGCATGTGGTTGGTTATATGGAGAGTTGTCCCATTGATACGAACAAGTAATTCTTGA
AGTTACAGGCTACATAACCCGAAGGAAAATTTTTGGCGGGGCTTAGAAAATTCTTTTGACACGAATGTATAGTTTCTTTTACCTTGTATCTACTAAATGT
TTGGGATCTGAATCTTGTTAGCAATGATAGCTTTTCAAGCACTGGAA
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3E1-3H12[7-19-12]//3F11..JPG