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Details




NbTI03G08

Phenotype Description
Plants were similar to vector control plants
Annotation
Solyc03g033840.2.1;genomic_reference:SL2.50ch03 gene_region:9723953-9726891 transcript_region:SL2.50ch03:9723953..9726891- functional_description:"26S protease regulatory subunit 6B homolog (AHRD V1 *--- PRS6B_ASPNG); contains Interpro domain(s) IPR003959 ATPase, AAA-type, core "
ref|XP_009603823.1|;PREDICTED: probable mitochondrial chaperone BCS1-B [Nicotiana tomentosiformis]
NbS00033465g0001.1;protein AED:0.16 eAED:0.16 QI:321|1|1|1|1|1|2|386|502; (*GB) gi|225428416|ref|XP_002283761.1| (e_value=0.0) PREDICTED: ATP-dependent zinc metalloprotease FtsH-like isoform 2 [Vitis vinifera];; (*SWP) sp|Q54DY9|BCS1B_DICDI (e_value=2e-33) Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum GN=bcsl1b PE=3 SV=1;; (*TAIR) AT3G50930.1 (e_value=8e-176) | Symbols: BCS1 | cytochrome BC1 synthesis | chr3:18929817-18931547 FORWARD LENGTH=576;; (*ITAG) Solyc03g033790.2.1 (e_value=3e-173) genomic_reference:SL2.40ch03 gene_region:9684519-9688514 transcript_region:SL2.40ch03:9684519..9688514+ functional_description:"Cell division protease ftsH homolog 3 (AHRD V1 *--- FTSH3_SYNY3); contains Interpro domain(s) IPR003959 ATPase, AAA-type, core ";
AT3G50930.1;| Symbols: BCS1 | cytochrome BC1 synthesis | chr3:18929817-18931547 FORWARD LENGTH=576
GO ID (Nr annotation)
GO:0005524
GO ID (Arabidopsis annotation)
GO:0005524
GO ID (Tomato annotation)
GO:0005524
GO ID (Niben annotation)
GO:0005524
Sequence
>NbTI03G08
CTCAAACTATAAATATAGTGAGGAAGCCAAAACCTCAGGAGGTTACGTTATCAGGGTTGCTAAACTTCATAGATGGGTTGTGGTCAAGCTGTGGAGATGA
GAGGATAATAGTGTTTACGACGAATCACAAAGATAGGTTGGATCCTGCACTGTTGAGGCCAGGCAGAATGGATGTGCACATCCACATGTCCTATTGCACT
CCTTGTGCTTTCAAGACATTGGCTTTGAATTATCTTGGAATTGAAGACCATCCTCTTTTCCCTGAAATCCTTGATCTTTTAGACAAGGCAATGGTGACCC
CTGCTGAAGTGGGTGAGCAATTGCTGAGGAATGAAGGGGTCGAGACTGCTATGAGCAGTCTCCTTGATTTCATCCACAAGAAAAAGAAAGAAGCTGATGA
AATCAAGGCAAAAGGTCTGGAAAATGAAGAAACCGAGAGAGAATTAGTTGTTGAGATTTCTCAGGGAGTAAATTATGATTAAGAATTTTATAGTTAATGG
ACATTCTTTCAGTTTAACTTTGATAGTTGAAGTGCATTTTGTTGAGAAAGGCATCATCTACTATAGTGAAAAAGAATGTTCATCAAAGAGATGATGTTGG
GTATATCAATGTACACTTAACTTGATTAATAACCATTAGAGCACCTTTAATTG
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3E1-3H12[7-19-12]//3G8..JPG