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Details




NbTI03G09

Phenotype Description
Stunted plants, mottled, crinkled, yellowish green leaves, reduced apical growth
Annotation
Solyc06g083820.2.1;genomic_reference:SL2.50ch06 gene_region:45415855-45418135 transcript_region:SL2.50ch06:45415855..45418135+ functional_description:"60 ribosomal protein L14 (AHRD V1 ***- B6TMP6_MAIZE); contains Interpro domain(s) IPR002784 Ribosomal protein L14 "
ref|XP_009757946.1|;PREDICTED: 60S ribosomal protein L14-1 [Nicotiana sylvestris]
NbS00009111g0021.1;protein AED:0.21 eAED:0.21 QI:0|1|0.8|1|1|1|5|366|173; (*GB) gi|76161008|gb|ABA40467.1| (e_value=1e-74) glycoprotein-like protein [Solanum tuberosum];; (*SWP) sp|Q9SIM4|RL141_ARATH (e_value=6e-68) 60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1;; (*TAIR) AT2G20450.1 (e_value=5e-69) | Symbols: | Ribosomal protein L14 | chr2:8813923-8815071 FORWARD LENGTH=134;; (*ITAG) Solyc06g083820.2.1 (e_value=4e-78) genomic_reference:SL2.40ch06 gene_region:45415855-45418135 transcript_region:SL2.40ch06:45415855..45418135+ functional_description:"60 ribosomal protein L14 (AHRD V1 ***- B6TMP6_MAIZE); contains Interpro domain(s) IPR002784 Ribosomal protein L14 ";
AT2G20450.1;| Symbols: | Ribosomal protein L14 | chr2:8813923-8815071 FORWARD LENGTH=134
GO ID (Nr annotation)
GO:0005840 GO:0003735 GO:0006412
GO ID (Arabidopsis annotation)
GO:0005840 GO:0003735 GO:0006412
GO ID (Tomato annotation)
GO:0005840 GO:0003735 GO:0006412
GO ID (Niben annotation)
GO:0005840 GO:0003735 GO:0006412
Sequence
>NbTI03G09
CATTCACAACCCCTTCAAATCACTGAAAATGCCGTTCAAGAGGTTCGTTGAAATCGGAAGAGTTGCGCTCGTTAACTACGGGAAAGACTATGGGAAGCTT
GTCGTCATCGTTGACGTCATCGACCAAAATAGGGCTCTTGTTGATGCTCCCGACATGGTGAGGAGCCAGATCAACTTCAAGAGGCTTTCCCTCACAGACA
TCAAAATCGACATCAAAAGGATTCCAAAGAAGAAGACCCTGGTTGCTGCTATGGATGCTGCCGATGTGAAGAACAAGTGGGAGTCCAGTTCATGGGGAAG
GAAGTTGATAGTGCAGAAGAGGAGGGCCTCACTTAACGACTTTGACAGGTTTAAGCTTATGCTGGCAAAGATCAAGAGGGCCGGTGTCGTGAGACAGGAG
CTTGCAAAGCTTAAAAAGGAGACCGTGGCTTAAGAACTTTCTTAGTAGCCACATTGATTTAGAACAATTTTGGAAGTTGCATTATTTTACCTTGGCAAAT
GTATTCTCAATGAAAGAACCCATGTTCTGTTTTTCTTTTTCCTTGTTTCTTCGACTGCTTCGAAATTATGTTTTTAATCTATGATGATGAACTGAGGATT
TCTTGCTGAGTTA
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3E1-3H12[7-19-12]//3G9..JPG