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Details




NbTI03G10

Phenotype Description
Stunted, bushy plants, mottled leaves
Annotation
Solyc05g056070.2.1;genomic_reference:SL2.50ch05 gene_region:64606977-64608378 transcript_region:SL2.50ch05:64606977..64608378+ functional_description:"Chlorophyll a-b binding protein 6A, chloroplastic (AHRD V1 ***- CB11_SOLLC); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein "
ref|XP_009769851.1|;PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic [Nicotiana sylvestris]
NbS00004910g0006.1;protein AED:0.31 eAED:0.31 QI:145|1|0.75|1|1|1|4|0|245; (*GB) gi|170388|gb|AAA34140.1| (e_value=2e-169) chlorophyll a/b-binding protein [Solanum lycopersicum];; (*SWP) sp|P12360|CB11_SOLLC (e_value=3e-166) Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1;; (*TAIR) AT3G54890.1 (e_value=3e-149) | Symbols: LHCA1 | photosystem I light harvesting complex gene 1 | chr3:20339706-20340922 REVERSE LENGTH=241;; (*ITAG) Solyc05g056070.2.1 (e_value=3e-172) genomic_reference:SL2.40ch05 gene_region:64606977-64608378 transcript_region:SL2.40ch05:64606977..64608378+ functional_description:"Chlorophyll a-b binding protein 6A, chloroplastic (AHRD V1 ***- CB11_SOLLC); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein ";
AT3G54890.1;| Symbols: LHCA1 | photosystem I light harvesting complex gene 1 | chr3:20339706-20340922 REVERSE LENGTH=241
GO ID (Nr annotation)
GO:0016020 GO:0009765
GO ID (Arabidopsis annotation)
GO:0016020 GO:0009765
GO ID (Tomato annotation)
GO:0016020 GO:0009765
GO ID (Niben annotation)
GO:0016020 GO:0009765
Sequence
>NbTI03G10
GCCGGACACACCAATGCTACATCTAGGTTCACCATGTCCGCCGAGTGGATGCCCGGTCAACCCCGTCCTTCCTACCTCGACGGCTCAGCCCCCGGAGACT
TTGGGTTTGATCCACTTGGTCTAGGAGAAGTACCATCAAACTTGGAGAGATACAAGGAGTCTGAACTCATTCACTGCAGATGGGCTATGCTTGCTGTTCC
AGGAATCCTAGTTCCAGAGGCATTGGGCTTGGGCAACTGGGTCAAGGCCCAAGAATGGGCTGCCATTCCAGGAGGACAAGCTACATATTTGGGCCAGCCC
GTTCCATGGGGCACTCTTCCTACAATTTTAGCCATTGAATTCTTAGCCATTGCTTTTGTAGAGCACCAAAGAAGTATGGAGAAGGACCCTGAGAAGAAGA
AATACCCTGGTGGGGCTTTTGACCCATTGGGCTACTCAAAAGACCCTAAAAAGTTTGAGGAACTTAAAGTCAAGGAAATAAAAAATGGTCGGCTTGCGTT
GTTGGCATTCGTGGGATTTTGTGTTCAACAATCAGCATACCCAGGAACAGGACCATTGGAAAATTTGGCAACTCACTTAGCTGATCCATGGCACAACAAC
ATTGGGGATGTCATTATCCCTAGAGGCATTTTACCTTGAACTGTGATATACCCCAATTTTCCCCCCTTGTAAAATGAAGCTCTCCCATGTGACAGATTTG
TAATCAAA
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3E1-3H12[7-19-12]//3G10..JPG