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Details




NbTI03G12

Phenotype Description
Plants were similar to vector control plants
Annotation
Solyc07g041720.1.1;evidence_code:10F1H1E1IEG genomic_reference:SL2.50ch07 gene_region:51367296-51367931 transcript_region:SL2.50ch07:51367296..51367931+ functional_description:"Oxalate oxidase-like germin 171 (AHRD V1 **** Q9FPQ0_BETVU); contains Interpro domain(s) IPR014710 RmlC-like jelly roll fold "
ref|XP_009596795.1|;PREDICTED: auxin-binding protein ABP19a-like [Nicotiana tomentosiformis]dbj|BAC77634.1| 24K germin like protein [Nicotiana tabacum]
NbS00010583g0001.1;protein AED:0.25 eAED:0.25 QI:0|-1|0|1|-1|1|1|0|210; (*GB) gi|31711507|dbj|BAC77634.1| (e_value=2e-132) 24K germin like protein [Nicotiana tabacum];; (*SWP) sp|O04011|ABP20_PRUPE (e_value=2e-91) Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1;; (*TAIR) AT5G20630.1 (e_value=9e-88) | Symbols: GLP3, GLP3A, GLP3B, ATGER3, GER3 | germin 3 | chr5:6975315-6975950 REVERSE LENGTH=211;; (*ITAG) Solyc07g041720.1.1 (e_value=3e-124) evidence_code:10F1H1E1IEG genomic_reference:SL2.40ch07 gene_region:51367296-51367931 transcript_region:SL2.40ch07:51367296..51367931+ functional_description:"Oxalate oxidase-like germin 171 (AHRD V1 **** Q9FPQ0_BETVU); contains Interpro domain(s) IPR014710 RmlC-like jelly roll fold ";
AT5G20630.1;| Symbols: GLP3, GLP3A, GLP3B, ATGER3, GER3 | germin 3 | chr5:6975315-6975950 REVERSE LENGTH=211
GO ID (Nr annotation)
GO:0045735
GO ID (Arabidopsis annotation)
GO:0045735
GO ID (Tomato annotation)
GO:0045735
GO ID (Niben annotation)
GO:0045735
Sequence
>NbTI03G12
ATCTTTCTTCATCTTCTCCCTTCTCTTCCTCTCCTCTGAAGCCGCCGTCCTCGATTTCTGCGTCGGGGACTTATCAGTTCCCGACGGACCAGGCGGCTAT
GCATGCAAAAAACCATCCGCAGTAACTGCGAATGACTTTGTATTTTCTGGCTTAGCCACTCCAGTTAAACTTAACCCTCTCATTAAAGCTGCGGTCACTC
CTGCTTTTGCTCCTCAATTTCCAGGACTTAACGGTCTTGGAATTTCAATGGCTAGGCTTGATTTAGCTATAGGTGGTGTTATCCCAATGCACACACACCC
TGGAGCATCAGAAGTACTTTATGTTGGATCAGGAGAAATTTGTGCTGGATTTATTTCTTCTTCGGACAACAAAG
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3E1-3H12[7-19-12]//3G12..JPG