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Details




NbTI03H05

Phenotype Description
Stunted plants, crinkled leaves
Annotation
Solyc07g061940.2.1;genomic_reference:SL2.50ch07 gene_region:62037698-62039615 transcript_region:SL2.50ch07:62037698..62039615- functional_description:"Acetolactate synthase (AHRD V1 **** D7RPJ7_SOLTU); contains Interpro domain(s) IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP binding region "
ref|XP_002274073.1|;PREDICTED: acetolactate synthase 1, chloroplastic-like [Vitis vinifera]
NbS00056878g0007.1;protein AED:0.27 eAED:0.27 QI:0|0|0|1|0.5|0.33|3|0|364; (*GB) gi|226027|prf||1407140B (e_value=0.0) acetolactate synthase SuRB;; (*SWP) sp|P09114|ILVB2_TOBAC (e_value=0.0) Acetolactate synthase 2, chloroplastic OS=Nicotiana tabacum GN=ALS SURB PE=1 SV=1;; (*TAIR) AT3G48560.1 (e_value=4e-141) | Symbols: CSR1, ALS, AHAS, TZP5, IMR1 | chlorsulfuron/imidazolinone resistant 1 | chr3:18001530-18003542 REVERSE LENGTH=670;; (*ITAG) Solyc03g044330.1.1 (e_value=1e-171) evidence_code:10F0H1E1IEG genomic_reference:SL2.40ch03 gene_region:12823169-12825148 transcript_region:SL2.40ch03:12823169..12825148- functional_description:"Acetolactate synthase (AHRD V1 **** D7RPJ7_SOLTU); contains Interpro domain(s) IPR012846 Acetolactate synthase, large subunit, biosynthetic ";
AT3G48560.1;| Symbols: CSR1, ALS, AHAS, TZP5, IMR1 | chlorsulfuron/imidazolinone resistant 1 | chr3:18001530-18003542 REVERSE LENGTH=670
GO ID (Nr annotation)
GO:0030976
GO ID (Arabidopsis annotation)
GO:0030976
GO ID (Tomato annotation)
GO:0030976
GO ID (Niben annotation)
GO:0030976
Sequence
>NbTI03H05
ACGGTCCCCCGGAGGCCCTGGAAAGAGAAGGGGTTACCAACGTCTTTGCGTACCCAGGGTGGCGCTTCCATGGAGATTCACCAAGCTTTGACTCGTTCAA
GCATCATCCGCAACGTGCTGCCACGTCACGAGCAGGGCGGTGTCTTCGCCGCTGAGGGTTACGCACGCGCCACCGGCTTTCCCGGCGTTTGCATTGCCAC
CTCCGGGCCCCGGCGCCACTAATCTCGTCAGCGGCC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3E1-3H12[7-19-12]//3H5..JPG