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Details




NbTI03H07

Phenotype Description
Stunted plants, crinkled leaves, no apical meristem
Annotation
Solyc11g066160.1.1;evidence_code:10F1H1E1IEG genomic_reference:SL2.50ch11 gene_region:48939641-48939952 transcript_region:SL2.50ch11:48939641..48939952+ functional_description:"Histone H4 (AHRD V1 ***- B6T0P4_MAIZE); contains Interpro domain(s) IPR001951 Histone H4 "
ref|XP_008359709.1|;PREDICTED: LOW QUALITY PROTEIN: histone H4-like [Malus domestica]
NbS00004898g0002.1;protein AED:0.00 eAED:0.00 QI:0|-1|0|1|-1|1|1|0|103; (*GB) gi|195617694|gb|ACG30677.1| (e_value=1e-51) histone H4 [Zea mays];; (*SWP) sp|P0CG89|H4_SOYBN (e_value=1e-52) Histone H4 OS=Glycine max PE=3 SV=1;; (*TAIR) AT5G59970.1 (e_value=9e-54) | Symbols: | Histone superfamily protein | chr5:24146352-24146663 REVERSE LENGTH=103;; (*ITAG) Solyc11g066160.1.1 (e_value=8e-54) evidence_code:10F1H1E1IEG genomic_reference:SL2.40ch11 gene_region:48939641-48939952 transcript_region:SL2.40ch11:48939641..48939952+ functional_description:"Histone H4 (AHRD V1 ***- B6T0P4_MAIZE); contains Interpro domain(s) IPR001951 Histone H4 ";
AT5G59970.1;| Symbols: | Histone superfamily protein | chr5:24146352-24146663 REVERSE LENGTH=103
GO ID (Nr annotation)
GO:0000786 GO:0005634 GO:0003677 GO:0046982
GO ID (Arabidopsis annotation)
GO:0000786 GO:0005634 GO:0003677 GO:0046982
GO ID (Tomato annotation)
GO:0000786 GO:0005634 GO:0003677 GO:0046982
GO ID (Niben annotation)
GO:0000786 GO:0005634 GO:0003677 GO:0046982
Sequence
>NbTI03H07
CAAATCTAAAACCCTAGAAGCTTCTTTTATCTTCAAATTTCTGTGTGAAAATGTCTGGTCGTGGAAAGGGAGGAAAGGGATTGGGCAAGGGAGGAGCTAA
GAGGCACAGGAAGGTGCTGAGGGATAACATCCAAGGAATTACGAAGCCCGCAATTCGTCGGTTGGCTCGTAGGGGAGGTGTGAAGCGTATATCTGGTCTG
ATCTACTAAGAGACACGTGGAGTGCTGAAGATCTTTCTAGAGAACGTGATTCGTGATGCTGTTACCTACACCGAGCACGCCAGGAGAAAGACTGTTACTG
CTATGGATGTCGTTTATGCACTCAAGAGGCAGGGCAGGACTCTCTATGGATTTGGTGGTTAGGTTGTTTAGGTGTGATTTTAGGTAACTGTATTTGTAGT
AATTGTAGATTTTCTGGAATTTCTGTTGTCTCTTTGTTGGTTTCTCCGCAGCTTTGTTCTAGTTGTTGTTCTTAAGGTCTTGATAATGTAATTTCTCATT
ACAGATTCAAGGAACAAAGTTCATTTTCTAGAAATTATAATGGTTGAATTCTGGCTCGCGGTTGTTGTTAATTGATTGATTCACCTATCGAATGACTATT
CACCTTTAAATTTCAG
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3E1-3H12[7-19-12]//3H7..JPG