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Details




NbTI03H09

Phenotype Description
Moderately stunted, bushy plants
Annotation
Solyc01g011350.2.1;genomic_reference:SL2.50ch01 gene_region:8685285-8695311 transcript_region:SL2.50ch01:8685285..8695311- functional_description:"cDNA clone J013057D02 full insert sequence (AHRD V1 **-- B7EBX1_ORYSJ)"
ref|XP_009617642.1|;PREDICTED: uncharacterized protein LOC104109944 isoform X2 [Nicotiana tomentosiformis]
NbS00051180g0005.1;protein AED:0.26 eAED:0.26 QI:576|1|1|1|0.4|0.45|11|453|308; (*TAIR) AT1G60670.2 (e_value=3e-64) | Symbols: | Protein of unknown function (DUF3755) | chr1:22344099-22347140 FORWARD LENGTH=254;; (*ITAG) Solyc01g011350.2.1 (e_value=6e-145) genomic_reference:SL2.40ch01 gene_region:8685285-8695311 transcript_region:SL2.40ch01:8685285..8695311- functional_description:"cDNA clone J013057D02 full insert sequence (AHRD V1 **-- B7EBX1_ORYSJ)";
AT1G10820.2;| Symbols: | Protein of unknown function (DUF3755) | chr1:3601437-3604650 REVERSE LENGTH=258
GO ID (Nr annotation)
GO ID (Arabidopsis annotation)
GO:0005694 GO:0043231 GO:0044444 GO:0003684 GO:0003690 GO:0003697 GO:0008301 GO:0042056 GO:0042393 GO:0043566 GO:0045322 GO:0050786 GO:0001773 GO:0002270 GO:0002322 GO:0002407 GO:0006265 GO:0006281 GO:0006325 GO:0006357 GO:0032270 GO:0033151 GO:0034162 GO:0034165 GO:0045935 GO:0048523 GO:0050918 GO:0051052 GO:1902533 GO:1902741 GO:1990774
GO ID (Tomato annotation)
GO ID (Niben annotation)
Sequence
>NbTI03H09
CAGAGAAGACTATAGTTTGGGGAAGAAAGTGAAAGACAGGAAGGATAAATCAGCAGAAGCATCCATGAAAACTGGTACATCCTCAGCTTCGCCATTGAGC
TTCATTCCATATTCACTCTCCTCAAATCATCATAATCATGGTGAAAATATCCCTTCTGCAGCATTACTTGGAGCGAGACATCTACTGGATGAAAACAATC
AGGCTCTCAATCAGATTTCGGCCAACCTTTCAACAGTCAAGTTGCAGGACAACATTGATCTCTTCATCCGAACGAGAAATAATATTGCGGCAGTTTTAAA
CGATATGAGAAATATGCCAGGGATTATGAGCCAAATGCCACCCCTCCCAGTTTTGTTGAATGAGGAACTTGCTAGTAGTGTTTTGCCTAGTATTACTCAG
CCGATGATGTTTGGCTCCACAAGTAGAATCCAGCTGAAACAAGAGCCAGGCTGCTGATGCAGAACGCTTGGTGTTAAATTTGGATTACTAGCTTGTGTAA
GTACACCAAATTTTTTGCTGTAAATGCATAAAAAGCTGGCAGGGTCTTTGCAGCTTGGGTATACGACTGGGTTCCACGGGAAGAACATTTATCAGAACCC
GTTTTTGGAAGCTGAACATCTTAACACGAGCACCAGGAAATAGCAGCCTCATGTTATTGCATTATCAAGGGGAAAAATGTTATCCTGATACTGCACTTAC
TGGCTTTTTCTTCTTGTTC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

2-1:3E1-3H12[7-19-12]//3H9..JPG