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Details




NbTI09F03

Phenotype Description
Plants were similar to vector control plants
Annotation
Solyc05g052790.2.1;genomic_reference:SL2.50ch05 gene_region:62122565-62126690 transcript_region:SL2.50ch05:62122565..62126690- functional_description:"Organic anion transporter (AHRD V1 **-* D7L9W2_ARALY); contains Interpro domain(s) IPR004853 Protein of unknown function DUF250 "
ref|XP_009587505.1|;PREDICTED: probable sugar phosphate/phosphate translocator At3g11320 [Nicotiana tomentosiformis]ref|XP_009772451.1| PREDICTED: probable sugar phosphate/phosphate translocator At3g11320 [Nicotiana sylvestris]
NbS00034568g0012.1;protein AED:0.34 eAED:0.35 QI:0|0.75|0.4|1|0.5|0.6|5|0|307; (*GB) gi|225449232|ref|XP_002279987.1| (e_value=0.0) PREDICTED: probable sugar phosphate/phosphate translocator At3g11320 [Vitis vinifera];; (*SWP) sp|Q5XF09|PT311_ARATH (e_value=0.0) Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1;; (*TAIR) AT3G11320.1 (e_value=0.0) | Symbols: | Nucleotide-sugar transporter family protein | chr3:3547017-3548539 REVERSE LENGTH=308;; (*ITAG) Solyc05g052790.2.1 (e_value=0.0) genomic_reference:SL2.40ch05 gene_region:62122565-62126690 transcript_region:SL2.40ch05:62122565..62126690- functional_description:"Organic anion transporter (AHRD V1 **-* D7L9W2_ARALY); contains Interpro domain(s) IPR004853 Protein of unknown function DUF250 ";
AT3G11320.1;| Symbols: | Nucleotide-sugar transporter family protein | chr3:3547017-3548539 REVERSE LENGTH=308
GO ID (Nr annotation)
GO:0016021 GO:0004693 GO:0008152 GO:0008643 GO:0051726
GO ID (Arabidopsis annotation)
GO:0005747 GO:0005759 GO:0009725 GO:0044765 GO:0055114
GO ID (Tomato annotation)
GO:0005737 GO:0016020 GO:0005515 GO:0032550 GO:0032561 GO:0043168 GO:0007165 GO:0010033 GO:0010604 GO:0010646 GO:0023051 GO:0031325 GO:0032501 GO:0044093 GO:0080090
GO ID (Niben annotation)
GO:0005581
Sequence
>NbTI09F03
ATTTAATCAAGCTATTGGTGCTACTACACCTTTTTTCACTGCTATATTTGCTTACTTGATGACACTGAAAAGGGAGGCTTGGTTGACTTATATCACTCTT
ATTCCTGTTGTCACTGGCGTTATCATTGCCAGTGGGGGTGAACCAAGTTTTCATCTGTTTGGATTCATAATATGTGTCGGTGCAACAGCTGCAAGAGCAC
TCAAATCAGTGCTTCAGGGGATTTTGCTGTCTTCTGAAGGGGAGAAGCTGAATTCCATGAACCTTCTACTCTATATGGCTCCTATAGCAGTTGTATTTCT
ATTGCCGGCAACGCTTATGATGGAAGAAAACGTAGTTGGCATCACATTGGCACTTGCAAGAGATGATAGTAGAATAATCTGGCTTTTGCTATTCAATTCT
GCCCTTGCCTATTTTGTAAATCTGACCAACTTTCTGGTGACAAAACACACCAGCGCCCTAACACTTCAGGTCCTGGGAAATGCGAAAGGAGCCGTAGCTG
TTGTTGTCTCAATCTTGATTTTCAGAAACCCGGTGTCAGTTACTGGGATGCTTGGCTATGCACTGACAGTTTTTGGGGTCATACTCTATAGTGAAGCGAA
GAAACGTAGTAAATGAACATTGAAAATCATTAACTTGCAACTTCTGACATTAATTGTCTGTTGAAGAAATAGTTCAACTTTCACGAGGCAAGTCGGATCA
TGCTCTTGCAATTGGTGTCACGGA
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

1-1:9E1-9H12[10-31-12]//9F3.JPG