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Details




NbTI09G10

Phenotype Description
Plants were similar to vector control plants
Annotation
Solyc03g005780.1.1;evidence_code:10F1H1E1IEG genomic_reference:SL2.50ch03 gene_region:543035-543838 transcript_region:SL2.50ch03:543035..543838+ functional_description:"Chlorophyll a-b binding protein 3C-like (AHRD V1 **** Q2XTE0_SOLTU); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein "
sp|P27496.1|CB25_TOBAC;RecName: Full=Chlorophyll a-b binding protein 50, chloroplastic; AltName: Full=LHCII type I CAB-50; Short=LHCP; Flags: Precursoremb|CAA36956.1| unnamed protein product [Nicotiana tabacum]
NbS00006290g0001.1;protein AED:0.21 eAED:0.21 QI:0|-1|0|1|-1|1|1|0|267; (*GB) gi|3036955|dbj|BAA25396.1| (e_value=0.0) light harvesting chlorophyll a/b-binding protein [Nicotiana sylvestris];; (*SWP) sp|P27496|CB25_TOBAC (e_value=0.0) Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1;; (*TAIR) AT1G29930.1 (e_value=8e-174) | Symbols: CAB1, AB140, CAB140, LHCB1.3 | chlorophyll A/B binding protein 1 | chr1:10478071-10478874 FORWARD LENGTH=267;; (*ITAG) Solyc03g005780.1.1 (e_value=0.0) evidence_code:10F1H1E1IEG genomic_reference:SL2.40ch03 gene_region:543035-543838 transcript_region:SL2.40ch03:543035..543838+ functional_description:"Chlorophyll a-b binding protein 3C-like (AHRD V1 **** Q2XTE0_SOLTU); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein ";
AT1G29930.1;| Symbols: CAB1, AB140, CAB140, LHCB1.3 | chlorophyll A/B binding protein 1 | chr1:10478071-10478874 FORWARD LENGTH=267
GO ID (Nr annotation)
GO:0016020 GO:0009765
GO ID (Arabidopsis annotation)
GO:0016020 GO:0009765
GO ID (Tomato annotation)
GO:0016020 GO:0009765
GO ID (Niben annotation)
GO:0016020 GO:0009765
Sequence
>NbTI09G10
ACACTTCAATCTCCTTATTAAACAATGGCTGCTTCTACAATGGCTCTCTCCTCTTCTTTTGCCGGAAAGGCAGTAAAACTCTCACCATCTTCCCCTGAAA
TCACCGGAAATGGAAAAGTTACCATGAGGAAGACTGCTAGCAAGGCCAAGCCTGCCTCTTCTGGTAGCCCATGGTACGGTCCTGACCGCGTCAAGTACTT
GGGCCCTTTCTCTGGTGAGTCTCCAAGCTACTTGACTGGTGAGTTTCCTGGTGACTACGGATGGGACACTGCCGGACTTTCAGCTGATCCAGAAACTTTT
GCCAAGAACCGTGAGTTGGAGGTGATCCACTGCAGATGGGCCATGCTTGGAGCTCTTGGATGTGTCTTCCCCGAACTCTTGGCCCGTAACGGTGTCAAGT
TTGGTGAGGCTGTATGGTTCAAGGCTGGATCCCAAATATTCAGCGAGGGTGGACTTGACTACTTGGGTAACCCAAGTTTGGTCCATGCTCAAAGCATCTT
GGCCATTTGGGCTTGTCAAGTTGTGTTGATGGGAGCCGTTGAGGGTTACCGTGTTGCTGGTGGACCTCTCGGT
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

1-1:9E1-9H12[10-31-12]//9G10.JPG