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Details




NbTI09H12

Phenotype Description
Mottled leaves, weak plant
Annotation
Solyc07g018360.2.1;genomic_reference:SL2.50ch07 gene_region:10406673-10413230 transcript_region:SL2.50ch07:10406673..10413230- functional_description:"Elongation factor Ts (AHRD V1 ***- Q9SZD6_ARATH); contains Interpro domain(s) IPR014039 Translation elongation factor EFTs/EF1B, dimerisation "
ref|XP_009611223.1|;PREDICTED: uncharacterized protein LOC104104773 [Nicotiana tomentosiformis]ref|XP_009611224.1| PREDICTED: uncharacterized protein LOC104104773 [Nicotiana tomentosiformis]
NbS00025848g0007.1;protein AED:0.20 eAED:0.20 QI:0|0.75|0.2|1|1|0.6|5|0|1101; (*GB) gi|357500731|ref|XP_003620654.1| (e_value=0.0) Elongation factor Ts [Medicago truncatula];; (*SWP) sp|A2BW76|EFTS_PROM5 (e_value=7e-86) Elongation factor Ts OS=Prochlorococcus marinus (strain MIT 9515) GN=tsf PE=3 SV=1;; (*TAIR) AT4G29060.1 (e_value=0.0) | Symbols: emb2726 | elongation factor Ts family protein | chr4:14317744-14321315 FORWARD LENGTH=953;; (*ITAG) Solyc07g018360.2.1 (e_value=0.0) genomic_reference:SL2.40ch07 gene_region:10406673-10413230 transcript_region:SL2.40ch07:10406673..10413230- functional_description:"Elongation factor Ts (AHRD V1 ***- Q9SZD6_ARATH); contains Interpro domain(s) IPR014039 Translation elongation factor EFTs/EF1B, dimerisation ";
AT4G29060.2;| Symbols: emb2726 | elongation factor Ts family protein | chr4:14317744-14321315 FORWARD LENGTH=709
GO ID (Nr annotation)
GO:0005622 GO:0003746 GO:0006414
GO ID (Arabidopsis annotation)
GO:0005622 GO:0003746 GO:0006414
GO ID (Tomato annotation)
GO:0005622 GO:0003746 GO:0006414
GO ID (Niben annotation)
GO:0005622 GO:0003746 GO:0006414
Sequence
>NbTI09H12
ATTGGTCGATGATTTGGCAATGCAAGTTGCAGCCTGCCCACAGGTGCAGTTTGTATCAATTGATGAGATTCCAGGAAGCATTGTCAACAAGGAAAAGGAG
TTGGAAATGCAGAGAGAAGATCTTAAGAACAAACCTGAAAATATAAGGGAGAAGATTGTTGAGCAGGGTCTCGAAGAGGCTTGGAGAGCTTGTTCTTTTG
GAGCAGCCTTTCATAAAAGATGACAGTGTTTTGGTGAAGGATTTGGTAAAGCAAACTGTTGCCGCCCTTGGAGAGAACATAAAAGTTAGGAGGTTCGTCC
GATTTACTCTAGGCAAGGAAGCCAAGGAAGAAGGAATAATTGAAGAGATAGCTGCTGTATGAAGTTAACTCTAACTTGGGATGCTGGATATAAGCAAGCA
GAAGATGCATAGGAAGACTTTMCACTTCTGGAGATAGAGCAAGTTTACATCAAATTGAGCTATTTTTGTATCCGAGTATAATGTTGTCATACTTGATGTG
CTGTGAGGCGATTAGTTTCTGTTC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

1-1:9E1-9H12[10-31-12]//9H12.JPG