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Details




NbTI11H02

Annotation
Solyc03g113240.2.1;genomic_reference:SL2.50ch03 gene_region:57496233-57497718 transcript_region:SL2.50ch03:57496233..57497718+ functional_description:"Unknown Protein (AHRD V1); contains Interpro domain(s) IPR009500 Protein of unknown function DUF1118 "
ref|XP_009801984.1|;PREDICTED: uncharacterized protein LOC104247619 [Nicotiana sylvestris]
NbS00010885g0017.1;protein AED:0.33 eAED:0.33 QI:0|1|0.5|1|0|0.5|2|0|189; (*GB) gi|225456666|ref|XP_002271953.1| (e_value=2e-52) PREDICTED: uncharacterized protein LOC100250168 [Vitis vinifera];; (*TAIR) AT1G74730.1 (e_value=4e-43) | Symbols: | Protein of unknown function (DUF1118) | chr1:28078995-28079831 FORWARD LENGTH=198;; (*ITAG) Solyc03g113240.2.1 (e_value=2e-64) genomic_reference:SL2.40ch03 gene_region:57496233-57497718 transcript_region:SL2.40ch03:57496233..57497718+ functional_description:"Unknown Protein (AHRD V1); contains Interpro domain(s) IPR009500 Protein of unknown function DUF1118 ";
AT1G74730.1;| Symbols: | Protein of unknown function (DUF1118) | chr1:28078995-28079831 FORWARD LENGTH=198
GO ID (Nr annotation)
GO:0009535 GO:0016021
GO ID (Arabidopsis annotation)
GO ID (Tomato annotation)
GO ID (Niben annotation)
Sequence
>NbTI11H02
AGAAGCTGAACTCTTCAATGGCGGCTTCAACCACTGCTTATCTGAGAAACGTAGAGCATGGCTTTAGTTCCAAGCCCCGATTTGGCCGTTTATTTCCCTT
CAAAAGTGCCCCGCGATTCTTGGCCATGGCTCCTAAAAAGAAGGTGAACAAGTATGACGACGCTTGGAAAAAGCAATGGTACGGAGCGGGACTATTCTAC
GAGGGCGGAGAACAAGTGGAAGTTGATGTGTTCAAAAAACTGGAGAAGCGAAAAGTTTTGAGCACTGTGGAGAAAGCTGGGCTTCTATCAAAGGCTGAAG
AACTAGGCTTTACGCTGTCCTCCATAGAGAAGTTAGGAGTATTTTCAAAGGCCGAAGAACTGGGGCTGCTCAGTTTGCTGGAGAAGGCAGCGAGTTTCGA
GCCTTCTGCTTTGGCGTCAGCGGCGCTTCCTATTTTAGTAGCGGCTATACTAGCAATCGTGTTGATACCCGATGATTCTGCGGGTCTTGTGGCCGTCCAG
GCCATTTTGGCTGGAACACTTGGGTTGGGAGCTGTCGGGTTGTTAGTTGGGTCAGTGGTTTTGGATGGGTTGCAGGAGGCTGATTGAATATCGTGTATAT
CCACCTCACCTAAAGATTATCCAAAAAACGAAAAAGAGAGGAACAAATTCTTAAAAAATGTCAAACAAAAGGGGATATTTTTATGCTTCTATTTTTTAGC
TCTCATTGTGATAATCATATGTCTGTGTC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit

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