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Details




NbTI12F04

Annotation
Solyc01g009180.2.1;genomic_reference:SL2.50ch01 gene_region:3229107-3234908 transcript_region:SL2.50ch01:3229107..3234908+ functional_description:"5- methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (AHRD V1 ***- B6UF55_MAIZE); contains Interpro domain(s) IPR006276 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase "
ref|XP_009591564.1|;PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase-like [Nicotiana tomentosiformis]
NbS00017361g0009.1;protein AED:0.18 eAED:0.18 QI:280|1|1|1|0.90|0.83|12|349|765; (*GB) gi|8439545|gb|AAF74983.1|AF082893_1 (e_value=0.0) methionine synthase [Solanum tuberosum];; (*SWP) sp|Q42699|METE_CATRO (e_value=0.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Catharanthus roseus GN=METE PE=2 SV=1;; (*TAIR) AT5G17920.2 (e_value=0.0) | Symbols: ATCIMS | Cobalamin-independent synthase family protein | chr5:5935771-5939195 FORWARD LENGTH=765;; (*ITAG) Solyc10g081510.1.1 (e_value=0.0) evidence_code:10F1H1E1IEG genomic_reference:SL2.40ch10 gene_region:61890862-61894137 transcript_region:SL2.40ch10:61890862..61894137+ functional_description:"5- methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (AHRD V1 ***- B6UF55_MAIZE); contains Interpro domain(s) IPR006276 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase ";
AT3G03780.3;| Symbols: ATMS2, MS2 | methionine synthase 2 | chr3:957602-960740 FORWARD LENGTH=765
GO ID (Nr annotation)
GO:0003871 GO:0008270 GO:0008652
GO ID (Arabidopsis annotation)
GO:0003871 GO:0008270 GO:0008652
GO ID (Tomato annotation)
GO:0003871 GO:0008270 GO:0008652
GO ID (Niben annotation)
GO:0003871 GO:0008270 GO:0008652
Sequence
>NbTI12F04
AGGATATCCTCGTATGGGGCCCAAAAGAGAGCTTAAGTTTGCGTTGGAATCTTTTTGGGATGGGAAGAGCAGTTCCGAGGATTTGGAAAAGGTGGCAGCT
GATCTTAGGTCATCCATTTGGAAGCAGATGGCTGAAGCTGGTATTAAATATATTCCGAGCAACACGTTCTCATATTATGACCAGGTCTTGGACACAACTG
CTATGTTAGGTGCAGTTCCGCCAAGATATAGTTGGAACGGTGGTGAAATTGGTTTTGATGTATACTTCCCGATGGCTAGGGGAAATGCCTCTGTACCTGC
CATGGAGATGACAAAGTGGTTTGACACCAACTACCACTACATTGTTCCTGAATTGGGGCCAGATGTTAAGTTCTGTTATGCATCTCACAAGGCAGTTAAT
GAATACAAGGAGGCTAAATCGCTAGGTGTTGACACTGTCACTGTCCTTGTCGGTCCAGTTTCCTTCCTCTTGTTATCAAAAGCAGCAAAAGGTGTTGAAA
TATCGTTTCCTCTTCTCTCACTGATTGACAAGATTCTTCCTGTTTACAAGGAAGTAATTGCTGAGCTGAAGGAAGCTGGTGCGAGTTGGATTCAGTTTGA
TGAGCCTACTCTTGTTAAAGATCTTGATTCTCATCAATTACGGGCATTTTCTCATACCTACTCAGAATTAGAGTCATCACTTTCTGGGTTTAAACGTCCT
CATTGAGACATACTTTACTGATGTTTCCTGCTGAAGCTTTTCAAAACAGTGACCGCTTTAAGAGGTGTTACTGCTTTGGGATTTGATCTAGTTCGTGGAT
CAAAGACTCTTGATT
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit