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Details




NbTI13C02

Annotation
Solyc03g083060.2.1;genomic_reference:SL2.50ch03 gene_region:46427167-46430205 transcript_region:SL2.50ch03:46427167..46430205- functional_description:"Unknown Protein (AHRD V1)"
ref|XP_009782622.1|;PREDICTED: cingulin [Nicotiana sylvestris]ref|XP_009782623.1| PREDICTED: cingulin [Nicotiana sylvestris]ref|XP_009782625.1| PREDICTED: cingulin [Nicotiana sylvestris]ref|XP_009782626.1| PREDICTED: cingulin [Nicotiana sylvestris]ref|XP_009782627.1| PREDICTED: cingulin [Nicotiana sylvestris]ref|XP_009782628.1| PREDICTED: cingulin [Nicotiana sylvestris]ref|XP_009782629.1| PREDICTED: cingulin [Nicotiana sylvestris]
NbS00031640g0004.1;protein AED:0.13 eAED:0.13 QI:0|1|0.66|1|1|0.66|3|469|728; (*GB) gi|359490807|ref|XP_002272450.2| (e_value=0.0) PREDICTED: uncharacterized protein LOC100255603 [Vitis vinifera];; (*TAIR) AT5G53020.1 (e_value=2e-131) | Symbols: | Ribonuclease P protein subunit P38-related | chr5:21499899-21502235 FORWARD LENGTH=720;; (*ITAG) Solyc03g083060.2.1 (e_value=0.0) genomic_reference:SL2.40ch03 gene_region:46427167-46430205 transcript_region:SL2.40ch03:46427167..46430205- functional_description:"Unknown Protein (AHRD V1)";
GO ID (Nr annotation)
GO:0005655 GO:0004526 GO:0090502
GO ID (Tomato annotation)
GO ID (Niben annotation)
GO:0005634 GO:0005747 GO:0005758 GO:0019899 GO:0006479 GO:0006979 GO:0007286 GO:0008285 GO:0032981 GO:0043434 GO:0045603 GO:0045663 GO:0045766 GO:0055114 GO:2000271
Sequence
>NbTI13C02
TCATGATCTAGTTCAGCTCCGACAAGAAAATATGAAGTTAGATGGATTGATACTGAATCGAGAAGTAGAATTACAATCCCTCAGGCAGCAACTAGCTGAG
TATTTTCTTGATTCCCAAAAGTCCAATGCAAATTCTTGTCCAAAAGACCATGTCATAGTCAATCATACAGTTTGGTCCAATGTAGCAGTTATAAAGACAA
AACAAGGAGAGAAAGAGCAAG
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit