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Details




NbTI13F01

Annotation
Solyc12g036220.1.1;evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch12 gene_region:29868498-29873746 transcript_region:SL2.50ch12:29868498..29873746+ functional_description:"Exonuclease DNA polymerase III epsilon subunit family (AHRD V1 *-*- C7NIC3_KYTSD); contains Interpro domain(s) IPR006055 Exonuclease "
ref|XP_009588141.1|;PREDICTED: uncharacterized protein LOC104085731 [Nicotiana tomentosiformis]
NbS00007404g0009.1;protein AED:0.07 eAED:0.07 QI:338|1|1|1|1|1|6|255|496; (*GB) gi|225457353|ref|XP_002281793.1| (e_value=0.0) PREDICTED: uncharacterized protein LOC100265514 [Vitis vinifera];; (*TAIR) AT5G07710.1 (e_value=7e-170) | Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr5:2453310-2455357 FORWARD LENGTH=468;; (*ITAG) Solyc12g036220.1.1 (e_value=0.0) evidence_code:10F0H1E1IEG genomic_reference:SL2.40ch12 gene_region:29868498-29873746 transcript_region:SL2.40ch12:29868498..29873746+ functional_description:"Exonuclease DNA polymerase III epsilon subunit family (AHRD V1 *-*- C7NIC3_KYTSD); contains Interpro domain(s) IPR006055 Exonuclease ";
AT1G74390.1;| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr1:27961760-27963826 REVERSE LENGTH=506
GO ID (Nr annotation)
GO:0003676
GO ID (Arabidopsis annotation)
GO:0003676
GO ID (Tomato annotation)
GO:0003676
GO ID (Niben annotation)
GO:0003676
Sequence
>NbTI13F01
TCTGACGACCTCTCTCTCATTTCCCAACTTTCTGTTCGGTGCAATGGTATTACCAGAGATGCTGTCACTTCTGCCCCTACCTTCGCTGATATCGCCGACA
AAGTTTTTGACATTCTCCATGGGAGGATATGGGCGGGCCACAATATTCTGAAATTCGATTGTCCAAGGATTCGGGAGGCGTTTGCTGGAATTAATAGGCC
TGCACCAGAACCCAAGGGAACAATTGATACACTTGCTTTGTTGACCCAAAGATTTGGAAGGAGAGCTGGTAACATGAAGATGGCCTCTCTTGCTACTTAT
TTTGGCCTTGGACAGCAAACACATAGGAGTTTGGATGATGTTCGAATGAATTTTGAAGTACTAAAATACTGTGCAACTGTCTTGTTTTTGGAATCCAGCC
TACCTGAAATATTAACTGAGAACAGTTGGGTGTCTCCTAATACTAACGGAAATGATGTTCTGGAGGGGATGGGCTCCAGTACAGATATACCTTCATCGAG
TGTCAAGATAGAAAGTCTTATGAAATCTATTGCAGAAGACAACATAGAATCAGATCATCCAATATTTCCACTTGTAAGCAGAAATGTGGAGATACCACAT
CTTCTTGAAACAAATTCGTCTAGACCCGACGCTTTTAACTTGGTCCAATTGAGCGCCGAAGTAAGGGGATCCATTCAATTAGATGACATGGAAGAAGAAC
CTGGTTCAGCAGATTCTCGACAATCTTCTGCATCAACTGCAACAGTAGGTTACATTGGCTGCACTGACTTCTTAGAACCAAATAATA
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit