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Details




NbTI14G02

Annotation
Solyc03g059180.2.1;genomic_reference:SL2.50ch03 gene_region:25233405-25241771 transcript_region:SL2.50ch03:25233405..25241771- functional_description:"Extracellular calcium sensing receptor (AHRD V1 *-*- C7BCU7_LIQFO); contains Interpro domain(s) IPR001763 Rhodanese-like "
ref|XP_009766716.1|;PREDICTED: uncharacterized protein LOC104218021 [Nicotiana sylvestris]
NbS00028812g0004.1;protein AED:0.29 eAED:0.29 QI:222|0.75|0.69|0.92|0.83|0.76|13|0|497; (*GB) gi|359478275|ref|XP_002274820.2| (e_value=3e-165) PREDICTED: uncharacterized protein LOC100249037 [Vitis vinifera];; (*TAIR) AT3G59780.1 (e_value=4e-137) | Symbols: | Rhodanese/Cell cycle control phosphatase superfamily protein | chr3:22086906-22090324 FORWARD LENGTH=686;; (*ITAG) Solyc03g059180.2.1 (e_value=2e-141) genomic_reference:SL2.40ch03 gene_region:25233405-25241771 transcript_region:SL2.40ch03:25233405..25241771- functional_description:"Extracellular calcium sensing receptor (AHRD V1 *-*- C7BCU7_LIQFO); contains Interpro domain(s) IPR001763 Rhodanese-like ";
AT3G59780.1;| Symbols: | Rhodanese/Cell cycle control phosphatase superfamily protein | chr3:22086906-22090324 FORWARD LENGTH=686
GO ID (Nr annotation)
GO ID (Arabidopsis annotation)
GO ID (Tomato annotation)
GO ID (Niben annotation)
GO:0005212
Sequence
>NbTI14G02
ATCATATTCCCTAGTTAAAGACACCCATTATTGAAGATGAGAGGTTGCTGAATAGACTGTTTTGATAGATGATGGCAACTCTACCTGTGTGTTCAGCTAC
TGCTTCCTTTTCTTCCCATACGCAGATTCCTCCTACCTATGAGGGGTTGAGATCCTTTTCTTCCTGTTGGAAGACATACCAAATGAAATGCAATGTCATG
GACCGGGTGTCTAATTCATTCCACCTGAGATTTGTTGATACTTCTGCTCTACCTAAGTCCATAACTAGAGGAGAATTGGCGTCATTGAACTTGGATACAA
GTTCCTTATCTGATGTGAAATCATATGCAATGGATGTTTTTAAGAACGGACAAAGTTATTTGAACAATTCGCTTGATGGAACTAGCTCATCTGTTACATC
AGCTCTTAGACAAGCAGTTGATCAAGTGATCAGTAAATTGCCATCAAAATCAGGGGAGTCGGCGGTGACAGCCTTGAAAGAAGCCTCTGGTAGAGTTGGT
GTTCTTGCTGTTGATGCATTGAGACATATATTTCTCATTGTTGAGGATTCGGTATCACGAGTTGTTGTCTATGCTTATGGGTCTGTAATGGAGATGCTTC
CTCCAGAGATCCAGGATGTGCTAAATGTTTGGCTTCTCACTCCATTGCGGGCAGGGTTATGTTGCTCTGGAGGGTTTGGAGAGAAACCTTGGCGTGGATC
CAAGTGACCCAATTATTCCGTTTGTTCTTTTCCTTGGGGCATCAGCCTCTTTTTGGGGCTTTTTA
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit