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Details




NbTI14G08

Annotation
Solyc07g018240.1.1;evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch07 gene_region:9832155-9832976 transcript_region:SL2.50ch07:9832155..9832976- functional_description:"Elongation of very long chain fatty acids protein 4 (AHRD V1 *-** B0W9Y0_CULQU); contains Interpro domain(s) IPR002076 GNS1/SUR4 membrane protein "
ref|XP_004242925.1|;PREDICTED: elongation of fatty acids protein 3-like [Solanum lycopersicum]
NbS00002769g0001.1;protein AED:0.22 eAED:0.22 QI:0|-1|0|1|-1|1|1|0|276; (*GB) gi|225448055|ref|XP_002275577.1| (e_value=2e-70) PREDICTED: putative elongation of fatty acids protein DDB_G0272012-like [Vitis vinifera];; (*SWP) sp|P39540|ELO1_YEAST (e_value=4e-16) Elongation of fatty acids protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ELO1 PE=1 SV=1;; (*TAIR) AT3G06470.1 (e_value=4e-70) | Symbols: | GNS1/SUR4 membrane protein family | chr3:1984206-1985042 FORWARD LENGTH=278;; (*ITAG) Solyc07g018240.1.1 (e_value=3e-122) evidence_code:10F0H1E1IEG genomic_reference:SL2.40ch07 gene_region:9832155-9832976 transcript_region:SL2.40ch07:9832155..9832976- functional_description:"Elongation of very long chain fatty acids protein 4 (AHRD V1 *-** B0W9Y0_CULQU); contains Interpro domain(s) IPR002076 GNS1/SUR4 membrane protein ";
AT3G06470.1;| Symbols: | GNS1/SUR4 membrane protein family | chr3:1984206-1985042 FORWARD LENGTH=278
GO ID (Nr annotation)
GO:0016021
GO ID (Arabidopsis annotation)
GO:0016021
GO ID (Tomato annotation)
GO:0016021
GO ID (Niben annotation)
GO:0016021
Sequence
>NbTI14G08
GGATCATAATACTCGTACACGTGGACCAGTGTTCTTCTGGATTTATTTCTGCTACCTTTCCAAGATTCTTGAATTCATAGATACCCTTCTAATCATACTC
AGCAGCTCTCGCTCGCGAAGGCTGTCGTTCCTCCACATCTACCACCATGTAGTTGTGAGTGTTCTCGGTTATGTCGGGCTCCAGGCTTCTCAGTCGCAGC
TTGGTCTTGCTGTCATCATTAATTGTTCTATTCACGTTCTAATGTATGCCTATTATTTCCTCTCTGCTATAGGAAAAAGGCCGTGGTGGAAGAAGGTGGT
CACAAACTGTCAAATTGTCCAATTCATGTTTGGCTTTGTATGTTCGGCTATGATGTTGTATTATCACTTTACTAGTGAGTTTGGATGCACCGGAGTTGGG
TCTTGGTGCTTCGGTTTTGCGTTTAATGCTTCACTTTTGGTGCTCTTTCTTGACTTTCATTCCAAGAACTATGCCAACAACAACAAGAAGGAGCTGGACA
AAGACAAATAACTCTATCATAGCGACTAGTTTATACTCTATGAATCTATGTATCCATTGATTATTTGTACTGCTTGCCTACTTTTTTACTTCCA
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit