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Details




NbTI15D12

Annotation
Solyc01g094540.2.1;genomic_reference:SL2.50ch01 gene_region:77730818-77733865 transcript_region:SL2.50ch01:77730818..77733865- functional_description:"Small nuclear ribonucleoprotein-associated protein B (AHRD V1 *-*- B6T3Z9_MAIZE); contains Interpro domain(s) IPR017131 Small ribonucleoprotein associated, SmB/SmN "
ref|XP_009772618.1|;PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like [Nicotiana sylvestris]ref|XP_009772619.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like [Nicotiana sylvestris]
NbS00011040g0001.1;protein AED:0.00 eAED:0.03 QI:0|1|0.66|1|0|0|3|164|270; (*GB) gi|255578051|ref|XP_002529896.1| (e_value=1e-58) small nuclear ribonucleoprotein-associated protein, putative [Ricinus communis];; (*SWP) sp|Q9N1Q0|RSMB_MACEU (e_value=3e-35) Small nuclear ribonucleoprotein-associated protein B' OS=Macropus eugenii GN=SNRPB PE=2 SV=1;; (*TAIR) AT5G44500.2 (e_value=1e-60) | Symbols: | Small nuclear ribonucleoprotein family protein | chr5:17927505-17928269 FORWARD LENGTH=254;; (*ITAG) Solyc01g094540.2.1 (e_value=9e-74) genomic_reference:SL2.40ch01 gene_region:77730818-77733865 transcript_region:SL2.40ch01:77730818..77733865- functional_description:"Small nuclear ribonucleoprotein-associated protein B (AHRD V1 *-*- B6T3Z9_MAIZE); contains Interpro domain(s) IPR017131 Small ribonucleoprotein associated, SmB/SmN ";
AT4G20440.4;| Symbols: | small nuclear ribonucleoprotein associated protein B | chr4:11022843-11023616 REVERSE LENGTH=257
GO ID (Nr annotation)
GO:0097525
GO ID (Arabidopsis annotation)
GO ID (Tomato annotation)
GO ID (Niben annotation)
Sequence
>NbTI15D12
AAAGAAGAACGTGAAGATCGGCGTACACTTGGTCTCGTACTTCTCCGTGGTGAAGAGGTTATTTCCATGACTGTTGAGGGTCCACCTCCTCCTGATGAAA
CTCGAGTCAAGTCTACTTCTGCCGGTTCTGCTGTTCCCGGCCCGGGACTTGGTCGGGCTGCCGGTCGTGGTGTTCCTACCGGGCCTTTAGTTCATGCTCA
GCCTGGACTTGCTGGGCCTGTTCGTGGTGTTGGTGGGCCTGCTCCTGGTATGATGCAGCCTCAAATTTCTCGGCCTCCGATGCCTAATGTATCTGCTCCC
CCGATGAATTACCCGCCGCCGGTGATGAGGCCGCCTGGTGGCCCACCAATGCAAATGCAGATGCAGAGACCTGGGGGCCCACCACCGCCTATGGCGCCCC
CACCACAATTCAGGCCTGGTGGTGGCCCACCACAGTTCCCGCCGCAGTTTGGTCAGCGGGCCAATGGTACCGCCGCCTCCCATGATGAGGGGGCACACCT
CCACC
More analysis about the clones: Nicotiana benthamiana resources at Boys Thomson Institute
To find off target genes: siRNA scan
To predict efficiency of siRNA: pssRNAit